Gene: COL3A1
mRNA Accession: X14420
Chromosome: chr 2

Sequence Walker  




IVS9-2A>G


Instruction: a189819054g ; Sequence Walker  
Type of changeGenomic CoordinatePosition Relative
to Natural Site
Closest
Natural Site
Initial(Ri)Final(Ri)Δ RiFold change% Binding (Final/Initial)Initial(Z)Final(z)Δ Z
Sites found for acceptor
Decreased189819055 0 189819055 10.3 2.1 -8.2 -286.20.3 0.3 -1.5 -1.8
Increased 189819065 10189819055 2.3 2.6 0.3 1.3125.6 -1.4 -1.4 0.1
Decreased1898190561189819055 1.0 -0.8 -1.7 -2.0NA -1.7 -2.1 -0.4
increased189819054-1189819055 -5.6 2.0 7.6 4.0401.1 -3.2 -1.5 1.7
Sites found for donor
No Change 189819007 -48189819055 2.6 2.6 0.0 1.0100 -1.6 -1.6 0.0
No Change 189819023 -32189819055 1.0 1.0 0.0 1.0100 -2.1 -2.1 0.0
Decreased189819057 2 189819055 1.7 0.7 -1.0 -2.049.9 -1.9 -2.2 -0.3
No Change 189819093 38189819055 5.9 5.9 0.0 1.0100 -0.6 -0.6 0.0



IVS13+2T>A


Instruction: t189820473a ; Sequence Walker  
Type of changeGenomic CoordinatePosition Relative
to Natural Site
Closest
Natural Site
Initial(Ri)Final(Ri)Δ RiFold change% Binding (Final/Initial)Initial(Z)Final(z)Δ Z
Sites found for acceptor
Increased 189820472 0189820472 1.9 3.1 1.3 2.4240.1 -1.5 -1.3 0.3
Sites found for donor
No Change 189820437 -35189820472 9.2 9.2 0.0 1.0100 0.4 0.4 0.0
No Change 189820511 39189820472 4.0 4.0 0.0 1.0100 -1.2 -1.2 0.0
Decreased1898204720189820472 6.1 -1.7 -7.8 -68.3NA -0.6 -3.0 -2.4



IVS17+2TA>AG


Instruction: i189822832,189822835ag ; Sequence Walker  
Type of changeGenomic CoordinatePosition Relative
to Natural Site
Closest
Natural Site
Initial(Ri)Final(Ri)Δ RiFold change% Binding (Final/Initial)Initial(Z)Final(z)Δ Z
Sites found for acceptor
Decreased189822853 21 189822832 4.9 3.8 -1.1 -2.147.2 -0.9 -1.1 -0.2
No Change 189822868 36189822832 1.6 1.6 0.0 1.0100 -1.6 -1.6 0.0
No Change 189822870 38189822832 3.1 3.1 0.0 1.0100 -1.3 -1.3 0.0
Sites found for donor
No Change 189822806 -26189822832 2.3 2.3 0.0 1.0100 -1.7 -1.7 0.0
No Change 189822815 -17189822832 2.1 2.1 0.0 1.0100 -1.8 -1.8 0.0
No Change 189822818 -14189822832 5.1 5.1 0.0 1.0100 -0.9 -0.9 0.0
Decreased189822832 0 189822832 8.5 0.3 -8.2 -292.80.3 0.2 -2.3 -2.5



IVS36+1G>C


Instruction: g189831812c ; Sequence Walker  
Type of changeGenomic CoordinatePosition Relative
to Natural Site
Closest
Natural Site
Initial(Ri)Final(Ri)Δ RiFold change% Binding (Final/Initial)Initial(Z)Final(z)Δ Z
Sites found for acceptor
No Change 189831785 -27189831812 3.3 3.3 0.0 1.0100 -1.2 -1.2 0.0
Increased 189831834 22189831812 3.5 4.4 0.9 1.9192.0 -1.2 -1.0 0.2
No Change 189831839 27189831812 2.7 2.7 0.0 1.0100 -1.3 -1.3 0.0
No Change 189831843 31189831812 2.6 2.6 0.0 1.0100 -1.4 -1.4 0.0
No Change 189831847 35189831812 0.6 0.6 0.0 1.0100 -1.8 -1.8 0.0
No Change 189831850 38189831812 0.3 0.3 0.0 1.0100 -1.9 -1.9 0.0
No Change 189831864 52189831812 2.1 2.1 0.0 1.0100 -1.5 -1.5 0.0
Sites found for donor
Decreased1898318120189831812 5.7 -4.1 -9.8 -52.0NA -0.7 -3.7 -3.0



IVS42+5G>C


Sequence Walker
Type of changeGenomic CoordinatePosition Relative
to Natural Site
Closest
Natural Site
Initial(Ri)Final(Ri)Δ RiFold change% Binding (Final/Initial)Initial(Z)Final(z)Δ Z
Unprocessed due to the following error. IVS42+5G>C the old base at 189835013 is NOT g! It is a.